Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGR5O75473 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.27■□□□□ 0.19
LGR5O75473 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
LGR5O75473 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 AL354702.1-201ENST00000442006 1960 ntBASIC16.26■□□□□ 0.19
LGR5O75473 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.26■□□□□ 0.19
LGR5O75473 TSPY25P-201ENST00000429463 745 ntBASIC16.26■□□□□ 0.19
LGR5O75473 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 NOC2LP1-201ENST00000450578 752 ntBASIC16.26■□□□□ 0.19
LGR5O75473 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.26■□□□□ 0.19
LGR5O75473 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 AC073352.2-201ENST00000609385 439 ntBASIC16.26■□□□□ 0.19
LGR5O75473 AP003419.4-201ENST00000616071 517 ntBASIC16.26■□□□□ 0.19
LGR5O75473 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 CICP14-201ENST00000629111 2732 ntBASIC16.26■□□□□ 0.19
LGR5O75473 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LGR5O75473 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 AC139749.1-202ENST00000617529 3139 ntBASIC16.26■□□□□ 0.19
LGR5O75473 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
LGR5O75473 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGR5O75473 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
LGR5O75473 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.25■□□□□ 0.19
LGR5O75473 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.25■□□□□ 0.19
LGR5O75473 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 AC104784.1-201ENST00000473096 294 ntBASIC16.25■□□□□ 0.19
LGR5O75473 RN7SL258P-201ENST00000478664 300 ntBASIC16.25■□□□□ 0.19
LGR5O75473 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.25■□□□□ 0.19
LGR5O75473 AC124068.2-201ENST00000569473 1109 ntBASIC16.25■□□□□ 0.19
LGR5O75473 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.25■□□□□ 0.19
LGR5O75473 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LGR5O75473 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.25■□□□□ 0.19
LGR5O75473 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.25■□□□□ 0.19
LGR5O75473 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LGR5O75473 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGR5O75473 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LGR5O75473 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LGR5O75473 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LGR5O75473 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LGR5O75473 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
LGR5O75473 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms