Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 RN7SKP230-201ENST00000365642 335 ntBASIC15.62■□□□□ 0.09
CAPN9O14815 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 FAM21FP-201ENST00000426241 1131 ntBASIC15.62■□□□□ 0.09
CAPN9O14815 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 HOMER2P2-201ENST00000451621 847 ntBASIC15.62■□□□□ 0.09
CAPN9O14815 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.62■□□□□ 0.09
CAPN9O14815 AC119751.2-201ENST00000504529 210 ntBASIC15.62■□□□□ 0.09
CAPN9O14815 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 MIR4259-201ENST00000584466 101 ntBASIC15.62■□□□□ 0.09
CAPN9O14815 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN9O14815 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN9O14815 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CAPN9O14815 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN9O14815 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN9O14815 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 ST20-AS1-201ENST00000560255 4223 ntBASIC15.61■□□□□ 0.09
CAPN9O14815 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CAPN9O14815 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.61■□□□□ 0.09
CAPN9O14815 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN9O14815 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
CAPN9O14815 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN9O14815 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN9O14815 MTHFR-210ENST00000641407 2387 ntBASIC15.61■□□□□ 0.09
CAPN9O14815 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN9O14815 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CAPN9O14815 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN9O14815 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CAPN9O14815 KRT8P4-201ENST00000509735 1454 ntBASIC15.6■□□□□ 0.09
CAPN9O14815 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CAPN9O14815 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN9O14815 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN9O14815 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CAPN9O14815 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.6■□□□□ 0.09
CAPN9O14815 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN9O14815 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN9O14815 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.6■□□□□ 0.09
CAPN9O14815 RN7SKP175-201ENST00000408472 289 ntBASIC15.6■□□□□ 0.09
CAPN9O14815 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms