Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC091271.1-201ENST00000611877 1162 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC009542.2-202ENST00000619004 1067 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC152010.1-201ENST00000415779 2006 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL354989.2-201ENST00000435838 1540 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL360270.3-201ENST00000609118 1348 ntBASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC006001.1-201ENST00000325130 474 ntBASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIR1202-201ENST00000408529 83 ntBASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC092135.3-201ENST00000624151 1846 ntBASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.9□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC005840.4-201ENST00000541242 2494 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC087386.2-201ENST00000623212 4637 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms