Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCDC187A0A096LP49 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AC136621.1-201ENST00000624017 2304 ntBASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AC144831.1-201ENST00000573312 2656 ntBASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AC097065.1-201ENST00000425737 517 ntBASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RPL13AP19-201ENST00000434320 584 ntBASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC187A0A096LP49 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 KRT8P28-201ENST00000433288 1390 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC092135.3-201ENST00000624151 1846 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC112693.3-201ENST00000624819 1983 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 ORAOV1P1-201ENST00000503108 395 ntBASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC187A0A096LP49 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms