Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 AC137767.1-201ENST00000602918 1920 ntBASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.73■■□□□ 1.07
AP4B1Q9Y6B7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 DUX4L18-201ENST00000553347 1267 ntBASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP4B1Q9Y6B7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.71■■□□□ 1.07
AP4B1Q9Y6B7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 AC007375.3-201ENST00000600936 2314 ntBASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
AP4B1Q9Y6B7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 AC127496.7-201ENST00000625110 1798 ntBASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP4B1Q9Y6B7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.68■■□□□ 1.06
AP4B1Q9Y6B7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP4B1Q9Y6B7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 MIR6089-201ENST00000616698 64 ntBASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms