Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX41Q9UJV9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
DDX41Q9UJV9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX41Q9UJV9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
DDX41Q9UJV9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX41Q9UJV9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX41Q9UJV9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 AC096631.2-201ENST00000436136 790 ntBASIC26.12■■□□□ 1.77
DDX41Q9UJV9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX41Q9UJV9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
DDX41Q9UJV9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX41Q9UJV9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX41Q9UJV9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX41Q9UJV9 AC068473.5-201ENST00000616428 2072 ntBASIC26.1■■□□□ 1.77
DDX41Q9UJV9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
DDX41Q9UJV9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX41Q9UJV9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX41Q9UJV9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.09■■□□□ 1.77
DDX41Q9UJV9 MIR6089-201ENST00000616698 64 ntBASIC26.09■■□□□ 1.77
DDX41Q9UJV9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX41Q9UJV9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX41Q9UJV9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX41Q9UJV9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 AC131274.2-201ENST00000580697 1507 ntBASIC26.07■■□□□ 1.76
DDX41Q9UJV9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
DDX41Q9UJV9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX41Q9UJV9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
DDX41Q9UJV9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX41Q9UJV9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX41Q9UJV9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX41Q9UJV9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX41Q9UJV9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX41Q9UJV9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.04■■□□□ 1.76
DDX41Q9UJV9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
DDX41Q9UJV9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX41Q9UJV9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX41Q9UJV9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX41Q9UJV9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX41Q9UJV9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX41Q9UJV9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX41Q9UJV9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
DDX41Q9UJV9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 AC005837.3-201ENST00000612163 286 ntBASIC26.01■■□□□ 1.75
DDX41Q9UJV9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX41Q9UJV9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX41Q9UJV9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX41Q9UJV9 AC005703.6-201ENST00000623265 1329 ntBASIC26■■□□□ 1.75
DDX41Q9UJV9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX41Q9UJV9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX41Q9UJV9 AC133561.4-201ENST00000566112 224 ntBASIC26■■□□□ 1.75
DDX41Q9UJV9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26■■□□□ 1.75
DDX41Q9UJV9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX41Q9UJV9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26■■□□□ 1.75
DDX41Q9UJV9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
DDX41Q9UJV9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms