Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.33■■□□□ 1.81
CPA4Q9UI42 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.33■■□□□ 1.81
CPA4Q9UI42 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.33■■□□□ 1.81
CPA4Q9UI42 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
CPA4Q9UI42 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPA4Q9UI42 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPA4Q9UI42 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPA4Q9UI42 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPA4Q9UI42 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 TSPY26P-201ENST00000476365 1326 ntBASIC26.32■■□□□ 1.8
CPA4Q9UI42 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.32■■□□□ 1.8
CPA4Q9UI42 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPA4Q9UI42 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPA4Q9UI42 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.31■■□□□ 1.8
CPA4Q9UI42 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.31■■□□□ 1.8
CPA4Q9UI42 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.31■■□□□ 1.8
CPA4Q9UI42 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.31■■□□□ 1.8
CPA4Q9UI42 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.31■■□□□ 1.8
CPA4Q9UI42 AL022069.1-201ENST00000568025 1636 ntBASIC26.31■■□□□ 1.8
CPA4Q9UI42 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPA4Q9UI42 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPA4Q9UI42 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPA4Q9UI42 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPA4Q9UI42 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPA4Q9UI42 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.3■■□□□ 1.8
CPA4Q9UI42 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPA4Q9UI42 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.29■■□□□ 1.8
CPA4Q9UI42 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPA4Q9UI42 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.28■■□□□ 1.8
CPA4Q9UI42 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.28■■□□□ 1.8
CPA4Q9UI42 pRNA.6-201ENST00000610482 90 ntBASIC26.28■■□□□ 1.8
CPA4Q9UI42 pRNA.5-201ENST00000612139 90 ntBASIC26.28■■□□□ 1.8
CPA4Q9UI42 pRNA.11-201ENST00000618423 90 ntBASIC26.28■■□□□ 1.8
CPA4Q9UI42 pRNA.13-201ENST00000619112 90 ntBASIC26.28■■□□□ 1.8
CPA4Q9UI42 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPA4Q9UI42 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CPA4Q9UI42 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CPA4Q9UI42 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPA4Q9UI42 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CPA4Q9UI42 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CPA4Q9UI42 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CPA4Q9UI42 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 ID1-201ENST00000376105 1233 ntBASIC26.25■■□□□ 1.79
CPA4Q9UI42 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 MIR6084-201ENST00000622012 110 ntBASIC26.25■■□□□ 1.79
CPA4Q9UI42 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.25■■□□□ 1.79
CPA4Q9UI42 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CPA4Q9UI42 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.24■■□□□ 1.79
CPA4Q9UI42 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPA4Q9UI42 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.24■■□□□ 1.79
CPA4Q9UI42 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.24■■□□□ 1.79
CPA4Q9UI42 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CPA4Q9UI42 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CPA4Q9UI42 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPA4Q9UI42 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPA4Q9UI42 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPA4Q9UI42 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.23■■□□□ 1.79
CPA4Q9UI42 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CPA4Q9UI42 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.23■■□□□ 1.79
CPA4Q9UI42 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPA4Q9UI42 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.23■■□□□ 1.79
CPA4Q9UI42 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPA4Q9UI42 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPA4Q9UI42 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPA4Q9UI42 SLC6A10P-202ENST00000431994 2058 ntBASIC26.23■■□□□ 1.79
CPA4Q9UI42 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPA4Q9UI42 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms