Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 AC021242.3-201ENST00000607598 1377 ntBASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 Z92544.1-202ENST00000571933 1220 ntBASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CHRNA9Q9UGM1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 AC012676.1-201ENST00000574705 1949 ntBASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 AC068473.5-201ENST00000616428 2072 ntBASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNA9Q9UGM1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 AC004448.1-201ENST00000458332 883 ntBASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 KRT125P-201ENST00000546827 989 ntBASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNA9Q9UGM1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNA9Q9UGM1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA9Q9UGM1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 SNX5-217ENST00000606557 1087 ntBASIC20.71■□□□□ 0.91
CHRNA9Q9UGM1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 AC239859.2-201ENST00000444165 318 ntBASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA9Q9UGM1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA9Q9UGM1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 MIR4787-201ENST00000607364 84 ntBASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 AL035685.1-201ENST00000636663 812 ntBASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA9Q9UGM1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms