Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.24■■■□□ 2.27
PPP4R2Q9NY27 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
PPP4R2Q9NY27 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PPP4R2Q9NY27 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PPP4R2Q9NY27 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.24■■■□□ 2.27
PPP4R2Q9NY27 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 RP9P-202ENST00000450133 1212 ntBASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PPP4R2Q9NY27 COMT-203ENST00000403184 2217 ntTSL 2 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R2Q9NY27 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PPP4R2Q9NY27 AL161729.1-201ENST00000604104 1402 ntBASIC29.2■■■□□ 2.27
PPP4R2Q9NY27 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PPP4R2Q9NY27 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.2■■■□□ 2.27
PPP4R2Q9NY27 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
PPP4R2Q9NY27 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 GCA-201ENST00000233612 1694 ntTSL 2 BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 AC093536.1-201ENST00000569153 554 ntBASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 AC092296.2-201ENST00000589470 999 ntBASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 AC242852.2-201ENST00000615738 1807 ntBASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R2Q9NY27 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
PPP4R2Q9NY27 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 KRT18P10-201ENST00000388836 1287 ntBASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R2Q9NY27 MYB-221ENST00000527615 2381 ntTSL 5 BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.16■■■□□ 2.26
PPP4R2Q9NY27 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.15■■■□□ 2.26
PPP4R2Q9NY27 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
PPP4R2Q9NY27 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.14■■■□□ 2.26
PPP4R2Q9NY27 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
PPP4R2Q9NY27 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
PPP4R2Q9NY27 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R2Q9NY27 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.13■■■□□ 2.25
PPP4R2Q9NY27 MIR3648-2-201ENST00000581792 180 ntBASIC29.13■■■□□ 2.25
PPP4R2Q9NY27 MIR3648-1-201ENST00000615959 180 ntBASIC29.13■■■□□ 2.25
PPP4R2Q9NY27 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
PPP4R2Q9NY27 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 ESRRAP2-201ENST00000418437 1549 ntBASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 RPS2P35-201ENST00000443417 897 ntBASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R2Q9NY27 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms