Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Q9N2K0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Q9N2K0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q9N2K0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Q9N2K0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q9N2K0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q9N2K0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Q9N2K0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.05■□□□□ 0.64
Q9N2K0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.05■□□□□ 0.64
Q9N2K0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q9N2K0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q9N2K0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.04■□□□□ 0.64
Q9N2K0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Q9N2K0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.04■□□□□ 0.64
Q9N2K0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9N2K0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.04■□□□□ 0.64
Q9N2K0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Q9N2K0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9N2K0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.03■□□□□ 0.64
Q9N2K0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Q9N2K0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9N2K0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9N2K0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9N2K0 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.03■□□□□ 0.64
Q9N2K0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.03■□□□□ 0.64
Q9N2K0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Q9N2K0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.03■□□□□ 0.64
Q9N2K0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
Q9N2K0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 AC131274.2-201ENST00000580697 1507 ntBASIC19.02■□□□□ 0.64
Q9N2K0 KRT18P60-201ENST00000312876 1297 ntBASIC19.02■□□□□ 0.64
Q9N2K0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.02■□□□□ 0.64
Q9N2K0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9N2K0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Q9N2K0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Q9N2K0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Q9N2K0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q9N2K0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.01■□□□□ 0.63
Q9N2K0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q9N2K0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.01■□□□□ 0.63
Q9N2K0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q9N2K0 HSD17B1P1-201ENST00000590052 955 ntBASIC19.01■□□□□ 0.63
Q9N2K0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
Q9N2K0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19■□□□□ 0.63
Q9N2K0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19■□□□□ 0.63
Q9N2K0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19■□□□□ 0.63
Q9N2K0 AC019171.1-201ENST00000601251 1056 ntBASIC19■□□□□ 0.63
Q9N2K0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 ALDH1A3-203ENST00000557963 1670 ntBASIC19■□□□□ 0.63
Q9N2K0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19■□□□□ 0.63
Q9N2K0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9N2K0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19■□□□□ 0.63
Q9N2K0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Q9N2K0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.99■□□□□ 0.63
Q9N2K0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.99■□□□□ 0.63
Q9N2K0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.99■□□□□ 0.63
Q9N2K0 AC022616.5-201ENST00000518796 181 ntBASIC18.99■□□□□ 0.63
Q9N2K0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9N2K0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.98■□□□□ 0.63
Q9N2K0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
Q9N2K0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Q9N2K0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Q9N2K0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms