Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 AF131216.4-201ENST00000638924 1588 ntBASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 AL035685.1-201ENST00000636663 812 ntBASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.45■■□□□ 1.02
NEUROD4Q9HD90 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEUROD4Q9HD90 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 AC012676.1-201ENST00000574705 1949 ntBASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.43■■□□□ 1.02
NEUROD4Q9HD90 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 AC092068.2-201ENST00000590491 1708 ntBASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.42■■□□□ 1.02
NEUROD4Q9HD90 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 ANOS2P-203ENST00000472227 1816 ntBASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.41■■□□□ 1.02
NEUROD4Q9HD90 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 AC068473.5-201ENST00000616428 2072 ntBASIC21.4■■□□□ 1.02
NEUROD4Q9HD90 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NEUROD4Q9HD90 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.39■■□□□ 1.01
NEUROD4Q9HD90 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 YBX1P4-201ENST00000392794 808 ntBASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NEUROD4Q9HD90 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 AC004448.1-201ENST00000458332 883 ntBASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms