Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM3Q9HCF6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 AC092803.2-201ENST00000564287 1899 ntBASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.21■■■□□ 2.59
TRPM3Q9HCF6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
TRPM3Q9HCF6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM3Q9HCF6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.19■■■□□ 2.58
TRPM3Q9HCF6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.19■■■□□ 2.58
TRPM3Q9HCF6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 AL137784.2-201ENST00000607332 1000 ntBASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.18■■■□□ 2.58
TRPM3Q9HCF6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 AC012414.1-201ENST00000556676 535 ntBASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.17■■■□□ 2.58
TRPM3Q9HCF6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TRPM3Q9HCF6 AL022069.1-201ENST00000568025 1636 ntBASIC31.16■■■□□ 2.58
TRPM3Q9HCF6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.16■■■□□ 2.58
TRPM3Q9HCF6 SLC6A10P-202ENST00000431994 2058 ntBASIC31.16■■■□□ 2.58
TRPM3Q9HCF6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRPM3Q9HCF6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 TSPY26P-201ENST00000476365 1326 ntBASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
TRPM3Q9HCF6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.14■■■□□ 2.58
TRPM3Q9HCF6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TRPM3Q9HCF6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.13■■■□□ 2.57
TRPM3Q9HCF6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRPM3Q9HCF6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
TRPM3Q9HCF6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRPM3Q9HCF6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRPM3Q9HCF6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRPM3Q9HCF6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRPM3Q9HCF6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRPM3Q9HCF6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TRPM3Q9HCF6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.1■■■□□ 2.57
TRPM3Q9HCF6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.1■■■□□ 2.57
TRPM3Q9HCF6 IGHV3-19-201ENST00000521488 291 ntBASIC31.1■■■□□ 2.57
TRPM3Q9HCF6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.1■■■□□ 2.57
TRPM3Q9HCF6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TRPM3Q9HCF6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms