Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC120024.1-201ENST00000562672 995 ntBASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.88■■□□□ 1.09
LRTM1Q9HBL6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 AC092068.2-201ENST00000590491 1708 ntBASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.87■■□□□ 1.09
LRTM1Q9HBL6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 AC074183.2-201ENST00000623112 922 ntBASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.86■■□□□ 1.09
LRTM1Q9HBL6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
LRTM1Q9HBL6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 PVT1_1.1-201ENST00000615125 194 ntBASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.84■■□□□ 1.09
LRTM1Q9HBL6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 TSPY13P-201ENST00000338964 914 ntBASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.83■■□□□ 1.09
LRTM1Q9HBL6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LRTM1Q9HBL6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 DUSP8P3-201ENST00000399571 1760 ntBASIC21.82■■□□□ 1.08
LRTM1Q9HBL6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 KRT18P24-201ENST00000344739 1156 ntBASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 AC010980.1-201ENST00000587192 1142 ntBASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 THA1P-201ENST00000590384 1145 ntBASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM1Q9HBL6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM1Q9HBL6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms