Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RC3H2Q9HBD1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RC3H2Q9HBD1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.58■■□□□ 1.53
RC3H2Q9HBD1 AC009086.3-201ENST00000623486 1008 ntBASIC24.58■■□□□ 1.53
RC3H2Q9HBD1 AL121749.1-202ENST00000609313 2153 ntBASIC24.58■■□□□ 1.53
RC3H2Q9HBD1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RC3H2Q9HBD1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
RC3H2Q9HBD1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.55■■□□□ 1.52
RC3H2Q9HBD1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.54■■□□□ 1.52
RC3H2Q9HBD1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RC3H2Q9HBD1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.52■■□□□ 1.52
RC3H2Q9HBD1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 AL031602.1-201ENST00000633169 911 ntBASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RC3H2Q9HBD1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.5■■□□□ 1.51
RC3H2Q9HBD1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 AC034268.1-201ENST00000441047 882 ntBASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 AL161729.1-201ENST00000604104 1402 ntBASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
RC3H2Q9HBD1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 YBX1P1-201ENST00000445822 960 ntBASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H2Q9HBD1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H2Q9HBD1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms