Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 AC044849.2-201ENST00000606596 710 ntBASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 AC092068.2-201ENST00000590491 1708 ntBASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 AL024507.2-201ENST00000606070 2574 ntBASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MAP1LC3AQ9H492 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.58■□□□□ 0.24
MAP1LC3AQ9H492 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 AC087741.3-201ENST00000624270 1347 ntBASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 AC126177.7-201ENST00000547904 679 ntBASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 AP006261.1-201ENST00000584783 668 ntBASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MAP1LC3AQ9H492 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 DUX4L29-201ENST00000425409 679 ntBASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.56■□□□□ 0.24
MAP1LC3AQ9H492 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 FOXO3B-201ENST00000395675 1928 ntBASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MAP1LC3AQ9H492 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms