Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF38Q9H0F5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 AL136162.1-201ENST00000607711 1078 ntBASIC23.73■■□□□ 1.39
RNF38Q9H0F5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF38Q9H0F5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF38Q9H0F5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF38Q9H0F5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF38Q9H0F5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.7■■□□□ 1.39
RNF38Q9H0F5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF38Q9H0F5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF38Q9H0F5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.7■■□□□ 1.39
RNF38Q9H0F5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 AC024257.2-201ENST00000549699 147 ntBASIC23.7■■□□□ 1.38
RNF38Q9H0F5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF38Q9H0F5 ALDH1A3-203ENST00000557963 1670 ntBASIC23.7■■□□□ 1.38
RNF38Q9H0F5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 AC135279.3-201ENST00000610945 1311 ntBASIC23.69■■□□□ 1.38
RNF38Q9H0F5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF38Q9H0F5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
RNF38Q9H0F5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF38Q9H0F5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF38Q9H0F5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF38Q9H0F5 AC099791.2-201ENST00000605725 427 ntBASIC23.68■■□□□ 1.38
RNF38Q9H0F5 AL031432.3-201ENST00000607698 485 ntBASIC23.68■■□□□ 1.38
RNF38Q9H0F5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF38Q9H0F5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 C17orf82-201ENST00000623772 1530 ntBASIC23.67■■□□□ 1.38
RNF38Q9H0F5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RNF38Q9H0F5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF38Q9H0F5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF38Q9H0F5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF38Q9H0F5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF38Q9H0F5 MIR935-201ENST00000401179 91 ntBASIC23.65■■□□□ 1.38
RNF38Q9H0F5 SUDS3P1-201ENST00000505831 966 ntBASIC23.65■■□□□ 1.38
RNF38Q9H0F5 DUX4L19-201ENST00000557448 1267 ntBASIC23.65■■□□□ 1.38
RNF38Q9H0F5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF38Q9H0F5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF38Q9H0F5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms