Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD4Q9H0A8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.06■□□□□ 0.8
COMMD4Q9H0A8 AL117328.2-201ENST00000624617 1940 ntBASIC20.06■□□□□ 0.8
COMMD4Q9H0A8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 AC092068.2-201ENST00000590491 1708 ntBASIC20.05■□□□□ 0.8
COMMD4Q9H0A8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD4Q9H0A8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD4Q9H0A8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
COMMD4Q9H0A8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COMMD4Q9H0A8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.02■□□□□ 0.79
COMMD4Q9H0A8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COMMD4Q9H0A8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 AC233723.2-201ENST00000623798 2106 ntBASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD4Q9H0A8 DUSP8P3-201ENST00000399571 1760 ntBASIC20■□□□□ 0.79
COMMD4Q9H0A8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COMMD4Q9H0A8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20■□□□□ 0.79
COMMD4Q9H0A8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20■□□□□ 0.79
COMMD4Q9H0A8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD4Q9H0A8 RNF126P1-201ENST00000567452 1320 ntBASIC20■□□□□ 0.79
COMMD4Q9H0A8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COMMD4Q9H0A8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.99■□□□□ 0.79
COMMD4Q9H0A8 AL022069.1-201ENST00000568025 1636 ntBASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms