Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF1Q9BSM1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 SNX5-217ENST00000606557 1087 ntBASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.97■□□□□ 0.63
PCGF1Q9BSM1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 AC141586.4-201ENST00000624558 1573 ntBASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF1Q9BSM1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF1Q9BSM1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 AL356740.2-201ENST00000601559 647 ntBASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 AL117332.1-201ENST00000622628 974 ntBASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF1Q9BSM1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCGF1Q9BSM1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
PCGF1Q9BSM1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.91■□□□□ 0.62
PCGF1Q9BSM1 LINC00543-201ENST00000567234 1845 ntBASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms