Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 AC233723.2-201ENST00000623798 2106 ntBASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 AC092068.2-201ENST00000590491 1708 ntBASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 C1orf229-201ENST00000623686 2258 ntBASIC19.2■□□□□ 0.66
HDHD3Q9BSH5 DUSP8P3-201ENST00000399571 1760 ntBASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 AL117328.2-201ENST00000624617 1940 ntBASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDHD3Q9BSH5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HDHD3Q9BSH5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 AL161729.1-201ENST00000604104 1402 ntBASIC19.17■□□□□ 0.66
HDHD3Q9BSH5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 LONRF2P2-201ENST00000439212 571 ntBASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 U85056.1-201ENST00000616429 682 ntBASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 EP400NL-214ENST00000641289 2402 ntBASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HDHD3Q9BSH5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDHD3Q9BSH5 AL022069.1-201ENST00000568025 1636 ntBASIC19.14■□□□□ 0.66
HDHD3Q9BSH5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDHD3Q9BSH5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDHD3Q9BSH5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HDHD3Q9BSH5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 RARRES2P2-201ENST00000394842 485 ntBASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDHD3Q9BSH5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 AC129492.7-201ENST00000622992 756 ntBASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms