Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AF131216.4-201ENST00000638924 1588 ntBASIC26.36■■□□□ 1.81
SDF4Q9BRK5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.36■■□□□ 1.81
SDF4Q9BRK5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SDF4Q9BRK5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SDF4Q9BRK5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SDF4Q9BRK5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.35■■□□□ 1.81
SDF4Q9BRK5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SDF4Q9BRK5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 KRT16P3-201ENST00000439127 1283 ntBASIC26.33■■□□□ 1.81
SDF4Q9BRK5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SDF4Q9BRK5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SDF4Q9BRK5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.31■■□□□ 1.8
SDF4Q9BRK5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SDF4Q9BRK5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SDF4Q9BRK5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SDF4Q9BRK5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.27■■□□□ 1.8
SDF4Q9BRK5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 MTDHP2-201ENST00000601468 714 ntBASIC26.26■■□□□ 1.79
SDF4Q9BRK5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SDF4Q9BRK5 DUSP8P5-201ENST00000422884 1815 ntBASIC26.25■■□□□ 1.79
SDF4Q9BRK5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 AC010997.5-201ENST00000609182 354 ntBASIC26.25■■□□□ 1.79
SDF4Q9BRK5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SDF4Q9BRK5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SDF4Q9BRK5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SDF4Q9BRK5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SDF4Q9BRK5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms