Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.79■□□□□ 0.92
SPENQ96T58 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.79■□□□□ 0.92
SPENQ96T58 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SPENQ96T58 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 AC099791.2-201ENST00000605725 427 ntBASIC20.79■□□□□ 0.92
SPENQ96T58 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.78■□□□□ 0.92
SPENQ96T58 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.78■□□□□ 0.92
SPENQ96T58 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.78■□□□□ 0.92
SPENQ96T58 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 AC005703.6-201ENST00000623265 1329 ntBASIC20.78■□□□□ 0.92
SPENQ96T58 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPENQ96T58 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPENQ96T58 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.77■□□□□ 0.92
SPENQ96T58 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPENQ96T58 AL138724.1-201ENST00000606771 1088 ntBASIC20.77■□□□□ 0.92
SPENQ96T58 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPENQ96T58 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPENQ96T58 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPENQ96T58 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SPENQ96T58 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.76■□□□□ 0.91
SPENQ96T58 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.76■□□□□ 0.91
SPENQ96T58 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.76■□□□□ 0.91
SPENQ96T58 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.76■□□□□ 0.91
SPENQ96T58 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPENQ96T58 AL137784.2-201ENST00000607332 1000 ntBASIC20.76■□□□□ 0.91
SPENQ96T58 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.76■□□□□ 0.91
SPENQ96T58 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPENQ96T58 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.75■□□□□ 0.91
SPENQ96T58 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.75■□□□□ 0.91
SPENQ96T58 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.75■□□□□ 0.91
SPENQ96T58 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPENQ96T58 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.75■□□□□ 0.91
SPENQ96T58 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.75■□□□□ 0.91
SPENQ96T58 AC008764.7-201ENST00000593779 1081 ntBASIC20.75■□□□□ 0.91
SPENQ96T58 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPENQ96T58 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPENQ96T58 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SPENQ96T58 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPENQ96T58 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.74■□□□□ 0.91
SPENQ96T58 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.74■□□□□ 0.91
SPENQ96T58 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.74■□□□□ 0.91
SPENQ96T58 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPENQ96T58 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPENQ96T58 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPENQ96T58 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.74■□□□□ 0.91
SPENQ96T58 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.73■□□□□ 0.91
SPENQ96T58 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.73■□□□□ 0.91
SPENQ96T58 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.73■□□□□ 0.91
SPENQ96T58 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
SPENQ96T58 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPENQ96T58 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SPENQ96T58 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPENQ96T58 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.73■□□□□ 0.91
SPENQ96T58 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.72■□□□□ 0.91
SPENQ96T58 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPENQ96T58 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SPENQ96T58 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPENQ96T58 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.72■□□□□ 0.91
SPENQ96T58 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPENQ96T58 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SPENQ96T58 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.72■□□□□ 0.91
SPENQ96T58 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
SPENQ96T58 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPENQ96T58 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SPENQ96T58 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.72■□□□□ 0.91
SPENQ96T58 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPENQ96T58 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SPENQ96T58 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 KRT18P61-201ENST00000585825 1298 ntBASIC20.71■□□□□ 0.91
SPENQ96T58 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.71■□□□□ 0.91
SPENQ96T58 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPENQ96T58 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPENQ96T58 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.7■□□□□ 0.91
SPENQ96T58 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms