Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NR1H4Q96RI1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NR1H4Q96RI1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NR1H4Q96RI1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NR1H4Q96RI1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 AC087741.3-201ENST00000624270 1347 ntBASIC21.4■■□□□ 1.02
NR1H4Q96RI1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.4■■□□□ 1.02
NR1H4Q96RI1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NR1H4Q96RI1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NR1H4Q96RI1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NR1H4Q96RI1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NR1H4Q96RI1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 AL162393.1-201ENST00000437852 946 ntBASIC21.38■■□□□ 1.01
NR1H4Q96RI1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NR1H4Q96RI1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NR1H4Q96RI1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NR1H4Q96RI1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
NR1H4Q96RI1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms