Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AAQ96QV6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AAQ96QV6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AAQ96QV6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AAQ96QV6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AAQ96QV6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H2AAQ96QV6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 MIR4281-201ENST00000580852 62 ntBASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H2AAQ96QV6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HIST1H2AAQ96QV6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H2AAQ96QV6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H2AAQ96QV6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AAQ96QV6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AAQ96QV6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AAQ96QV6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AAQ96QV6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 AC103834.1-201ENST00000520383 144 ntBASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AAQ96QV6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AAQ96QV6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 AC131274.2-201ENST00000580697 1507 ntBASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 AL031848.2-201ENST00000607670 837 ntBASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AAQ96QV6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms