Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SNX5-217ENST00000606557 1087 ntBASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 RARRES2P1-201ENST00000474487 481 ntBASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MS4A4EQ96PG1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A4EQ96PG1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 AC021242.3-201ENST00000607598 1377 ntBASIC21.21■□□□□ 0.99
MS4A4EQ96PG1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A4EQ96PG1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A4EQ96PG1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
MS4A4EQ96PG1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A4EQ96PG1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 Z92544.1-202ENST00000571933 1220 ntBASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MS4A4EQ96PG1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms