Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
IFT43Q96FT9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.36■■□□□ 1.33
IFT43Q96FT9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
IFT43Q96FT9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.36■■□□□ 1.33
IFT43Q96FT9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
IFT43Q96FT9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
IFT43Q96FT9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
IFT43Q96FT9 KRT16P3-201ENST00000439127 1283 ntBASIC23.35■■□□□ 1.33
IFT43Q96FT9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.35■■□□□ 1.33
IFT43Q96FT9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
IFT43Q96FT9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
IFT43Q96FT9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
IFT43Q96FT9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
IFT43Q96FT9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.34■■□□□ 1.33
IFT43Q96FT9 AC092028.1-203ENST00000608262 953 ntBASIC23.34■■□□□ 1.33
IFT43Q96FT9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.33■■□□□ 1.33
IFT43Q96FT9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
IFT43Q96FT9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IFT43Q96FT9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
IFT43Q96FT9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
IFT43Q96FT9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
IFT43Q96FT9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.33■■□□□ 1.32
IFT43Q96FT9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
IFT43Q96FT9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
IFT43Q96FT9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.32■■□□□ 1.32
IFT43Q96FT9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.32■■□□□ 1.32
IFT43Q96FT9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.32■■□□□ 1.32
IFT43Q96FT9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.32■■□□□ 1.32
IFT43Q96FT9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
IFT43Q96FT9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 AF131216.4-201ENST00000638924 1588 ntBASIC23.31■■□□□ 1.32
IFT43Q96FT9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 AL022069.1-201ENST00000568025 1636 ntBASIC23.31■■□□□ 1.32
IFT43Q96FT9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.31■■□□□ 1.32
IFT43Q96FT9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.31■■□□□ 1.32
IFT43Q96FT9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
IFT43Q96FT9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.31■■□□□ 1.32
IFT43Q96FT9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
IFT43Q96FT9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 AC008406.3-201ENST00000620001 1374 ntBASIC23.3■■□□□ 1.32
IFT43Q96FT9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
IFT43Q96FT9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.3■■□□□ 1.32
IFT43Q96FT9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.3■■□□□ 1.32
IFT43Q96FT9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.3■■□□□ 1.32
IFT43Q96FT9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.3■■□□□ 1.32
IFT43Q96FT9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
IFT43Q96FT9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.29■■□□□ 1.32
IFT43Q96FT9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.29■■□□□ 1.32
IFT43Q96FT9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 AC068473.5-201ENST00000616428 2072 ntBASIC23.29■■□□□ 1.32
IFT43Q96FT9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IFT43Q96FT9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.28■■□□□ 1.32
IFT43Q96FT9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.28■■□□□ 1.32
IFT43Q96FT9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.28■■□□□ 1.32
IFT43Q96FT9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.28■■□□□ 1.32
IFT43Q96FT9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.28■■□□□ 1.32
IFT43Q96FT9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IFT43Q96FT9 AL161729.1-201ENST00000604104 1402 ntBASIC23.27■■□□□ 1.32
IFT43Q96FT9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.27■■□□□ 1.32
IFT43Q96FT9 TSPY9P-201ENST00000440215 945 ntBASIC23.27■■□□□ 1.32
IFT43Q96FT9 TSPY11P-201ENST00000442607 1045 ntBASIC23.27■■□□□ 1.32
IFT43Q96FT9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
IFT43Q96FT9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.27■■□□□ 1.32
IFT43Q96FT9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
IFT43Q96FT9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.26■■□□□ 1.31
IFT43Q96FT9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
IFT43Q96FT9 AC019069.1-201ENST00000610008 1333 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms