Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
R3HDM4Q96D70 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HDM4Q96D70 GUSBP5-201ENST00000418136 578 ntBASIC18.73■□□□□ 0.59
R3HDM4Q96D70 AC087393.1-201ENST00000582896 145 ntBASIC18.73■□□□□ 0.59
R3HDM4Q96D70 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HDM4Q96D70 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HDM4Q96D70 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.72■□□□□ 0.59
R3HDM4Q96D70 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 RPS2P7-201ENST00000447334 885 ntBASIC18.71■□□□□ 0.59
R3HDM4Q96D70 THA1P-201ENST00000590384 1145 ntBASIC18.71■□□□□ 0.59
R3HDM4Q96D70 AC019171.1-201ENST00000601251 1056 ntBASIC18.71■□□□□ 0.59
R3HDM4Q96D70 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
R3HDM4Q96D70 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
R3HDM4Q96D70 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
R3HDM4Q96D70 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 AL592295.1-201ENST00000400984 884 ntBASIC18.7■□□□□ 0.58
R3HDM4Q96D70 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
R3HDM4Q96D70 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HDM4Q96D70 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HDM4Q96D70 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 AC090877.2-201ENST00000558441 1738 ntBASIC18.67■□□□□ 0.58
R3HDM4Q96D70 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 AC239859.2-201ENST00000444165 318 ntBASIC18.67■□□□□ 0.58
R3HDM4Q96D70 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.67■□□□□ 0.58
R3HDM4Q96D70 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HDM4Q96D70 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HDM4Q96D70 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HDM4Q96D70 LONRF2P2-201ENST00000439212 571 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms