Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RARRES2P1-201ENST00000474487 481 ntBASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 AC010980.1-201ENST00000587192 1142 ntBASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40AQ8WXH6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40AQ8WXH6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40AQ8WXH6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40AQ8WXH6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 RPS2P7-201ENST00000447334 885 ntBASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 AC087393.1-201ENST00000582896 145 ntBASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 EP400NL-214ENST00000641289 2402 ntBASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 LINC00565-201ENST00000562710 2331 ntBASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40AQ8WXH6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40AQ8WXH6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40AQ8WXH6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40AQ8WXH6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RAB40AQ8WXH6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB40AQ8WXH6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40AQ8WXH6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms