Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 ECEL1P2-201ENST00000461596 1295 ntBASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRUB1Q8WWH5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 AC092068.2-201ENST00000590491 1708 ntBASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB1Q8WWH5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB1Q8WWH5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB1Q8WWH5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB1Q8WWH5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 AL161729.1-201ENST00000604104 1402 ntBASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 AC093536.1-201ENST00000569153 554 ntBASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 AL137060.1-201ENST00000618151 2648 ntBASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB1Q8WWH5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 ECEL1P1-201ENST00000373592 1742 ntBASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 AC016575.1-201ENST00000607026 382 ntBASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB1Q8WWH5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 GUSBP5-202ENST00000510805 1989 ntBASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
TRUB1Q8WWH5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRUB1Q8WWH5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB1Q8WWH5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.76■□□□□ 0.91
TRUB1Q8WWH5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB1Q8WWH5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
TRUB1Q8WWH5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB1Q8WWH5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms