Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DUX4L8-201ENST00000629013 1275 ntBASIC28.14■■■□□ 2.1
SNED1Q8TER0 DUX4L3-201ENST00000630187 1275 ntBASIC28.14■■■□□ 2.1
SNED1Q8TER0 DUX4L7-201ENST00000630678 1275 ntBASIC28.14■■■□□ 2.1
SNED1Q8TER0 DUX4L5-201ENST00000630834 1275 ntBASIC28.14■■■□□ 2.1
SNED1Q8TER0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.14■■■□□ 2.09
SNED1Q8TER0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SNED1Q8TER0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNED1Q8TER0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
SNED1Q8TER0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.13■■■□□ 2.09
SNED1Q8TER0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.13■■■□□ 2.09
SNED1Q8TER0 AC022517.1-201ENST00000592429 346 ntBASIC28.13■■■□□ 2.09
SNED1Q8TER0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
SNED1Q8TER0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNED1Q8TER0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
SNED1Q8TER0 YBX1P1-201ENST00000445822 960 ntBASIC28.12■■■□□ 2.09
SNED1Q8TER0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNED1Q8TER0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNED1Q8TER0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNED1Q8TER0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.12■■■□□ 2.09
SNED1Q8TER0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
SNED1Q8TER0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.11■■■□□ 2.09
SNED1Q8TER0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SNED1Q8TER0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNED1Q8TER0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.1■■■□□ 2.09
SNED1Q8TER0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNED1Q8TER0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNED1Q8TER0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNED1Q8TER0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.1■■■□□ 2.09
SNED1Q8TER0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.1■■■□□ 2.09
SNED1Q8TER0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNED1Q8TER0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNED1Q8TER0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNED1Q8TER0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNED1Q8TER0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
SNED1Q8TER0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.08■■■□□ 2.09
SNED1Q8TER0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNED1Q8TER0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
SNED1Q8TER0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.08■■■□□ 2.09
SNED1Q8TER0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.08■■■□□ 2.09
SNED1Q8TER0 AC009086.3-201ENST00000623486 1008 ntBASIC28.08■■■□□ 2.09
SNED1Q8TER0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SNED1Q8TER0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.07■■■□□ 2.08
SNED1Q8TER0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.07■■■□□ 2.08
SNED1Q8TER0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.07■■■□□ 2.08
SNED1Q8TER0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SNED1Q8TER0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
SNED1Q8TER0 SLC6A10P-202ENST00000431994 2058 ntBASIC28.06■■■□□ 2.08
SNED1Q8TER0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNED1Q8TER0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNED1Q8TER0 AC027612.3-201ENST00000413684 1047 ntBASIC28.06■■■□□ 2.08
SNED1Q8TER0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SNED1Q8TER0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.06■■■□□ 2.08
SNED1Q8TER0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNED1Q8TER0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNED1Q8TER0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNED1Q8TER0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNED1Q8TER0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.05■■■□□ 2.08
SNED1Q8TER0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNED1Q8TER0 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.05■■■□□ 2.08
SNED1Q8TER0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SNED1Q8TER0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.05■■■□□ 2.08
SNED1Q8TER0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNED1Q8TER0 AC092803.2-201ENST00000564287 1899 ntBASIC28.05■■■□□ 2.08
SNED1Q8TER0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SNED1Q8TER0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
SNED1Q8TER0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.04■■■□□ 2.08
SNED1Q8TER0 AL137784.2-201ENST00000607332 1000 ntBASIC28.04■■■□□ 2.08
SNED1Q8TER0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.04■■■□□ 2.08
SNED1Q8TER0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.04■■■□□ 2.08
SNED1Q8TER0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNED1Q8TER0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
SNED1Q8TER0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.03■■■□□ 2.08
SNED1Q8TER0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.03■■■□□ 2.08
SNED1Q8TER0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SNED1Q8TER0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.03■■■□□ 2.08
SNED1Q8TER0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SNED1Q8TER0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SNED1Q8TER0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.02■■■□□ 2.08
SNED1Q8TER0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
SNED1Q8TER0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.02■■■□□ 2.08
SNED1Q8TER0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.01■■■□□ 2.08
SNED1Q8TER0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
SNED1Q8TER0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.01■■■□□ 2.08
SNED1Q8TER0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms