Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 AC087393.1-201ENST00000582896 145 ntBASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 AC133552.2-201ENST00000619106 1032 ntBASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y2Q8TD47 LINC00526-201ENST00000581067 1875 ntBASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 ECEL1P1-201ENST00000373592 1742 ntBASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RPS4Y2Q8TD47 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 GUSBP5-202ENST00000510805 1989 ntBASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y2Q8TD47 AL022069.1-201ENST00000568025 1636 ntBASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 SPCS2P3-201ENST00000500401 656 ntBASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 ABHD17AP5-201ENST00000580133 923 ntBASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 LINC00565-201ENST00000562710 2331 ntBASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.94■□□□□ 0.78
RPS4Y2Q8TD47 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 AC127496.7-201ENST00000625110 1798 ntBASIC19.93■□□□□ 0.78
RPS4Y2Q8TD47 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RPS4Y2Q8TD47 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms