Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.4■■□□□ 1.18
HMGCLL1Q8TB92 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HMGCLL1Q8TB92 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HMGCLL1Q8TB92 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HMGCLL1Q8TB92 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HMGCLL1Q8TB92 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HMGCLL1Q8TB92 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
HMGCLL1Q8TB92 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 AC079834.2-201ENST00000609776 1949 ntBASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 AL161729.1-201ENST00000604104 1402 ntBASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLL1Q8TB92 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 KRT125P-201ENST00000546827 989 ntBASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLL1Q8TB92 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 AC239859.2-201ENST00000444165 318 ntBASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLL1Q8TB92 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLL1Q8TB92 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 AC131274.2-201ENST00000580697 1507 ntBASIC22.34■■□□□ 1.17
HMGCLL1Q8TB92 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 MIR4787-201ENST00000607364 84 ntBASIC22.33■■□□□ 1.17
HMGCLL1Q8TB92 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCLL1Q8TB92 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.33■■□□□ 1.16
HMGCLL1Q8TB92 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
HMGCLL1Q8TB92 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCLL1Q8TB92 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCLL1Q8TB92 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HMGCLL1Q8TB92 AL022069.1-201ENST00000568025 1636 ntBASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 AC004448.1-201ENST00000458332 883 ntBASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms