Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 AL161729.1-201ENST00000604104 1402 ntBASIC19.5■□□□□ 0.71
TMEM104Q8NE00 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM104Q8NE00 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 DUX4L9-201ENST00000449051 1259 ntBASIC19.49■□□□□ 0.71
TMEM104Q8NE00 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 MIR6765-201ENST00000614092 87 ntBASIC19.49■□□□□ 0.71
TMEM104Q8NE00 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 DUSP8P3-201ENST00000399571 1760 ntBASIC19.49■□□□□ 0.71
TMEM104Q8NE00 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TMEM104Q8NE00 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM104Q8NE00 AL117328.2-201ENST00000624617 1940 ntBASIC19.47■□□□□ 0.71
TMEM104Q8NE00 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM104Q8NE00 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
TMEM104Q8NE00 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM104Q8NE00 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 C1orf229-201ENST00000623686 2258 ntBASIC19.45■□□□□ 0.7
TMEM104Q8NE00 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TMEM104Q8NE00 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 LONRF2P2-201ENST00000439212 571 ntBASIC19.44■□□□□ 0.7
TMEM104Q8NE00 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM104Q8NE00 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 AL022069.1-201ENST00000568025 1636 ntBASIC19.43■□□□□ 0.7
TMEM104Q8NE00 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM104Q8NE00 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM104Q8NE00 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 EP400NL-214ENST00000641289 2402 ntBASIC19.41■□□□□ 0.7
TMEM104Q8NE00 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM104Q8NE00 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM104Q8NE00 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.4■□□□□ 0.7
TMEM104Q8NE00 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM104Q8NE00 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM104Q8NE00 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms