Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC168Q8NDH2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 CD99P1-205ENST00000527459 561 ntBASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC168Q8NDH2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC168Q8NDH2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 NCF1B-203ENST00000435988 1254 ntBASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 AC137761.2-201ENST00000561729 223 ntBASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 AC145350.3-201ENST00000569033 163 ntBASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC168Q8NDH2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC168Q8NDH2 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.27■□□□□ 0.67
CCDC168Q8NDH2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC168Q8NDH2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 AC006970.2-201ENST00000450065 779 ntBASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 IGHV3-19-201ENST00000521488 291 ntBASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 AL354811.1-201ENST00000610286 706 ntBASIC19.26■□□□□ 0.67
CCDC168Q8NDH2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC168Q8NDH2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 AC008687.6-201ENST00000596318 630 ntBASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 AC073111.5-205ENST00000641717 521 ntBASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC168Q8NDH2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC168Q8NDH2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC168Q8NDH2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC168Q8NDH2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC168Q8NDH2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms