Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRX1Q8N7U7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRX1Q8N7U7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRX1Q8N7U7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 AC137630.3-201ENST00000607245 391 ntBASIC19■□□□□ 0.63
TPRX1Q8N7U7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPRX1Q8N7U7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19■□□□□ 0.63
TPRX1Q8N7U7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TPRX1Q8N7U7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TPRX1Q8N7U7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 AL451085.2-201ENST00000605085 799 ntBASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRX1Q8N7U7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 BX664725.1-201ENST00000438252 379 ntBASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPRX1Q8N7U7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 AC004448.1-201ENST00000458332 883 ntBASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TPRX1Q8N7U7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPRX1Q8N7U7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 AC009299.2-201ENST00000482477 511 ntBASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 SNX5-217ENST00000606557 1087 ntBASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TPRX1Q8N7U7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms