Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 UNC93B8-201ENST00000511903 705 ntBASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf42Q8N5U0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf42Q8N5U0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 MIR6722-201ENST00000617286 78 ntBASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 AC004812.2-201ENST00000611079 2094 ntBASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
C11orf42Q8N5U0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C11orf42Q8N5U0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C11orf42Q8N5U0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf42Q8N5U0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.82■□□□□ 0.6
C11orf42Q8N5U0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 TSPY9P-201ENST00000440215 945 ntBASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 TSPY11P-201ENST00000442607 1045 ntBASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
C11orf42Q8N5U0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 AC093323.1-202ENST00000635031 2045 ntBASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C11orf42Q8N5U0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 AC010997.5-201ENST00000609182 354 ntBASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf42Q8N5U0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms