Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATG4DQ86TL0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.7■□□□□ 0.9
ATG4DQ86TL0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATG4DQ86TL0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.7■□□□□ 0.9
ATG4DQ86TL0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATG4DQ86TL0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.69■□□□□ 0.9
ATG4DQ86TL0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATG4DQ86TL0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.68■□□□□ 0.9
ATG4DQ86TL0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.68■□□□□ 0.9
ATG4DQ86TL0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATG4DQ86TL0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 GUSBP5-201ENST00000418136 578 ntBASIC20.66■□□□□ 0.9
ATG4DQ86TL0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATG4DQ86TL0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 SNX5-217ENST00000606557 1087 ntBASIC20.65■□□□□ 0.9
ATG4DQ86TL0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATG4DQ86TL0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATG4DQ86TL0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATG4DQ86TL0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ATG4DQ86TL0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 AC239859.2-201ENST00000444165 318 ntBASIC20.64■□□□□ 0.89
ATG4DQ86TL0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 ANOS2P-203ENST00000472227 1816 ntBASIC20.64■□□□□ 0.89
ATG4DQ86TL0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATG4DQ86TL0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 AC021242.3-201ENST00000607598 1377 ntBASIC20.63■□□□□ 0.89
ATG4DQ86TL0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATG4DQ86TL0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATG4DQ86TL0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms