Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.8■■□□□ 1.4
DENND4AQ7Z401 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND4AQ7Z401 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND4AQ7Z401 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.8■■□□□ 1.4
DENND4AQ7Z401 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND4AQ7Z401 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND4AQ7Z401 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND4AQ7Z401 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.78■■□□□ 1.4
DENND4AQ7Z401 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
DENND4AQ7Z401 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND4AQ7Z401 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 AC012414.1-201ENST00000556676 535 ntBASIC23.77■■□□□ 1.4
DENND4AQ7Z401 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 AC009086.3-201ENST00000623486 1008 ntBASIC23.77■■□□□ 1.4
DENND4AQ7Z401 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND4AQ7Z401 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 YBX1P1-201ENST00000445822 960 ntBASIC23.76■■□□□ 1.39
DENND4AQ7Z401 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DENND4AQ7Z401 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.75■■□□□ 1.39
DENND4AQ7Z401 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.74■■□□□ 1.39
DENND4AQ7Z401 AC022517.1-201ENST00000592429 346 ntBASIC23.74■■□□□ 1.39
DENND4AQ7Z401 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.74■■□□□ 1.39
DENND4AQ7Z401 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.73■■□□□ 1.39
DENND4AQ7Z401 MIR3181-201ENST00000578512 73 ntBASIC23.73■■□□□ 1.39
DENND4AQ7Z401 AL137784.2-201ENST00000607332 1000 ntBASIC23.73■■□□□ 1.39
DENND4AQ7Z401 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DENND4AQ7Z401 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.71■■□□□ 1.39
DENND4AQ7Z401 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DENND4AQ7Z401 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DENND4AQ7Z401 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
DENND4AQ7Z401 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.7■■□□□ 1.38
DENND4AQ7Z401 TSPY26P-201ENST00000476365 1326 ntBASIC23.7■■□□□ 1.38
DENND4AQ7Z401 AL022069.1-201ENST00000568025 1636 ntBASIC23.7■■□□□ 1.38
DENND4AQ7Z401 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.7■■□□□ 1.38
DENND4AQ7Z401 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
DENND4AQ7Z401 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DENND4AQ7Z401 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DENND4AQ7Z401 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms