Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
NHLRC1Q6VVB1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NHLRC1Q6VVB1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 AC021242.3-201ENST00000607598 1377 ntBASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.4■□□□□ 0.86
NHLRC1Q6VVB1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NHLRC1Q6VVB1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NHLRC1Q6VVB1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NHLRC1Q6VVB1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.39■□□□□ 0.86
NHLRC1Q6VVB1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NHLRC1Q6VVB1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NHLRC1Q6VVB1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NHLRC1Q6VVB1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 SNX5-217ENST00000606557 1087 ntBASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NHLRC1Q6VVB1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NHLRC1Q6VVB1 AC079834.2-201ENST00000609776 1949 ntBASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NHLRC1Q6VVB1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms