Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNKSR3Q6P9H4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.83■■□□□ 1.56
CNKSR3Q6P9H4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.83■■□□□ 1.56
CNKSR3Q6P9H4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 RARRES2P11-201ENST00000635158 484 ntBASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CNKSR3Q6P9H4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 AC090192.1-201ENST00000517740 490 ntBASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 AC126544.1-201ENST00000580842 1059 ntBASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CNKSR3Q6P9H4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 YBX1P1-201ENST00000445822 960 ntBASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNKSR3Q6P9H4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 AC022517.1-201ENST00000592429 346 ntBASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.79■■□□□ 1.56
CNKSR3Q6P9H4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 pRNA.6-201ENST00000610482 90 ntBASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 pRNA.5-201ENST00000612139 90 ntBASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 IKBKGP1-201ENST00000612193 1073 ntBASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 pRNA.11-201ENST00000618423 90 ntBASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 pRNA.13-201ENST00000619112 90 ntBASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.78■■□□□ 1.56
CNKSR3Q6P9H4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CNKSR3Q6P9H4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CNKSR3Q6P9H4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.77■■□□□ 1.56
CNKSR3Q6P9H4 KRT18P5-201ENST00000436075 1291 ntBASIC24.77■■□□□ 1.56
CNKSR3Q6P9H4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.77■■□□□ 1.56
CNKSR3Q6P9H4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 TSPY26P-201ENST00000476365 1326 ntBASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CNKSR3Q6P9H4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 AL031602.1-201ENST00000633169 911 ntBASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 AL161729.1-201ENST00000604104 1402 ntBASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CNKSR3Q6P9H4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 AL137784.2-201ENST00000607332 1000 ntBASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CNKSR3Q6P9H4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms