Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H2AA3Q6FI13 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H2AA3Q6FI13 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.93■■□□□ 1.1
HIST2H2AA3Q6FI13 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H2AA3Q6FI13 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 AC021242.3-201ENST00000607598 1377 ntBASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 KRT125P-201ENST00000546827 989 ntBASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HIST2H2AA3Q6FI13 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 Z92544.1-202ENST00000571933 1220 ntBASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H2AA3Q6FI13 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HIST2H2AA3Q6FI13 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
HIST2H2AA3Q6FI13 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.89■■□□□ 1.1
HIST2H2AA3Q6FI13 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIST2H2AA3Q6FI13 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 SNX5-217ENST00000606557 1087 ntBASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
HIST2H2AA3Q6FI13 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST2H2AA3Q6FI13 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST2H2AA3Q6FI13 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms