Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO1Q2MKA7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.83■□□□□ 0.77
RSPO1Q2MKA7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RSPO1Q2MKA7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RSPO1Q2MKA7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO1Q2MKA7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO1Q2MKA7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 SNX5-217ENST00000606557 1087 ntBASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 AC021242.3-201ENST00000607598 1377 ntBASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 ANOS2P-203ENST00000472227 1816 ntBASIC19.81■□□□□ 0.76
RSPO1Q2MKA7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.8■□□□□ 0.76
RSPO1Q2MKA7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO1Q2MKA7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO1Q2MKA7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.77■□□□□ 0.76
RSPO1Q2MKA7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RSPO1Q2MKA7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RSPO1Q2MKA7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.76■□□□□ 0.75
RSPO1Q2MKA7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms