Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP38P78345 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RPP38P78345 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP38P78345 AC137630.3-201ENST00000607245 391 ntBASIC21.45■■□□□ 1.02
RPP38P78345 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP38P78345 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.45■■□□□ 1.02
RPP38P78345 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP38P78345 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP38P78345 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP38P78345 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.44■■□□□ 1.02
RPP38P78345 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.44■■□□□ 1.02
RPP38P78345 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP38P78345 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP38P78345 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP38P78345 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.44■■□□□ 1.02
RPP38P78345 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPP38P78345 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPP38P78345 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPP38P78345 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPP38P78345 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.43■■□□□ 1.02
RPP38P78345 MIR6089-201ENST00000616698 64 ntBASIC21.43■■□□□ 1.02
RPP38P78345 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.43■■□□□ 1.02
RPP38P78345 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPP38P78345 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.43■■□□□ 1.02
RPP38P78345 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RPP38P78345 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RPP38P78345 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.42■■□□□ 1.02
RPP38P78345 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RPP38P78345 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.42■■□□□ 1.02
RPP38P78345 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RPP38P78345 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPP38P78345 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RPP38P78345 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.41■■□□□ 1.02
RPP38P78345 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPP38P78345 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
RPP38P78345 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPP38P78345 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPP38P78345 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.4■■□□□ 1.02
RPP38P78345 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPP38P78345 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.4■■□□□ 1.02
RPP38P78345 AC239859.2-201ENST00000444165 318 ntBASIC21.4■■□□□ 1.02
RPP38P78345 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.4■■□□□ 1.02
RPP38P78345 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPP38P78345 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.4■■□□□ 1.02
RPP38P78345 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
RPP38P78345 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.39■■□□□ 1.02
RPP38P78345 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RPP38P78345 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.39■■□□□ 1.01
RPP38P78345 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPP38P78345 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPP38P78345 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPP38P78345 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RPP38P78345 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPP38P78345 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPP38P78345 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPP38P78345 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPP38P78345 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPP38P78345 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RPP38P78345 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.37■■□□□ 1.01
RPP38P78345 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RPP38P78345 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RPP38P78345 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.37■■□□□ 1.01
RPP38P78345 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.37■■□□□ 1.01
RPP38P78345 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP38P78345 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.37■■□□□ 1.01
RPP38P78345 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP38P78345 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP38P78345 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RPP38P78345 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.36■■□□□ 1.01
RPP38P78345 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RPP38P78345 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.36■■□□□ 1.01
RPP38P78345 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RPP38P78345 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP38P78345 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RPP38P78345 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RPP38P78345 CLDN5-201ENST00000403084 2357 ntBASIC21.35■■□□□ 1.01
RPP38P78345 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RPP38P78345 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.35■■□□□ 1.01
RPP38P78345 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.35■■□□□ 1.01
RPP38P78345 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms