Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB8AP61006 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.73■■□□□ 1.07
RAB8AP61006 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.73■■□□□ 1.07
RAB8AP61006 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB8AP61006 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB8AP61006 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB8AP61006 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB8AP61006 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB8AP61006 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 ALDH1A3-203ENST00000557963 1670 ntBASIC21.72■■□□□ 1.07
RAB8AP61006 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB8AP61006 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.72■■□□□ 1.07
RAB8AP61006 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB8AP61006 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB8AP61006 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAB8AP61006 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.71■■□□□ 1.07
RAB8AP61006 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RAB8AP61006 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.71■■□□□ 1.07
RAB8AP61006 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB8AP61006 MIR6722-201ENST00000617286 78 ntBASIC21.71■■□□□ 1.07
RAB8AP61006 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB8AP61006 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB8AP61006 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RAB8AP61006 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB8AP61006 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB8AP61006 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB8AP61006 KRT16P3-201ENST00000439127 1283 ntBASIC21.7■■□□□ 1.06
RAB8AP61006 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB8AP61006 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB8AP61006 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB8AP61006 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB8AP61006 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.7■■□□□ 1.06
RAB8AP61006 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB8AP61006 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.69■■□□□ 1.06
RAB8AP61006 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB8AP61006 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB8AP61006 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAB8AP61006 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.69■■□□□ 1.06
RAB8AP61006 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB8AP61006 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB8AP61006 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB8AP61006 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB8AP61006 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB8AP61006 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
RAB8AP61006 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.68■■□□□ 1.06
RAB8AP61006 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB8AP61006 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB8AP61006 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB8AP61006 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB8AP61006 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB8AP61006 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB8AP61006 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
RAB8AP61006 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.67■■□□□ 1.06
RAB8AP61006 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAB8AP61006 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
RAB8AP61006 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
RAB8AP61006 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB8AP61006 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB8AP61006 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB8AP61006 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB8AP61006 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAB8AP61006 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB8AP61006 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB8AP61006 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB8AP61006 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB8AP61006 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAB8AP61006 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB8AP61006 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RAB8AP61006 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB8AP61006 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB8AP61006 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB8AP61006 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB8AP61006 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB8AP61006 AL356441.2-201ENST00000443009 864 ntBASIC21.65■■□□□ 1.06
RAB8AP61006 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.65■■□□□ 1.06
RAB8AP61006 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB8AP61006 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB8AP61006 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB8AP61006 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB8AP61006 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB8AP61006 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.64■■□□□ 1.05
RAB8AP61006 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB8AP61006 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms