Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR4P51571 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR4P51571 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.97■□□□□ 0.95
SSR4P51571 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.96■□□□□ 0.95
SSR4P51571 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR4P51571 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SSR4P51571 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.96■□□□□ 0.95
SSR4P51571 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR4P51571 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SSR4P51571 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.96■□□□□ 0.95
SSR4P51571 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR4P51571 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.96■□□□□ 0.95
SSR4P51571 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR4P51571 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR4P51571 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR4P51571 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR4P51571 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.95■□□□□ 0.94
SSR4P51571 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR4P51571 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.95■□□□□ 0.94
SSR4P51571 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR4P51571 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
SSR4P51571 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.94■□□□□ 0.94
SSR4P51571 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR4P51571 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SSR4P51571 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.94■□□□□ 0.94
SSR4P51571 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR4P51571 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR4P51571 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SSR4P51571 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.94■□□□□ 0.94
SSR4P51571 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR4P51571 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR4P51571 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR4P51571 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR4P51571 AC096631.2-201ENST00000436136 790 ntBASIC20.93■□□□□ 0.94
SSR4P51571 AL139246.5-201ENST00000606645 996 ntBASIC20.93■□□□□ 0.94
SSR4P51571 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR4P51571 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR4P51571 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.92■□□□□ 0.94
SSR4P51571 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR4P51571 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SSR4P51571 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR4P51571 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SSR4P51571 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR4P51571 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.91■□□□□ 0.94
SSR4P51571 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR4P51571 AC009102.2-201ENST00000606772 1639 ntBASIC20.91■□□□□ 0.94
SSR4P51571 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR4P51571 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.9■□□□□ 0.94
SSR4P51571 AC141586.4-201ENST00000624558 1573 ntBASIC20.9■□□□□ 0.94
SSR4P51571 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.9■□□□□ 0.94
SSR4P51571 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.9■□□□□ 0.94
SSR4P51571 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SSR4P51571 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SSR4P51571 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR4P51571 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SSR4P51571 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR4P51571 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR4P51571 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR4P51571 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.89■□□□□ 0.93
SSR4P51571 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.89■□□□□ 0.93
SSR4P51571 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR4P51571 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SSR4P51571 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR4P51571 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR4P51571 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.89■□□□□ 0.93
SSR4P51571 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.88■□□□□ 0.93
SSR4P51571 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 AC110285.6-201ENST00000617652 491 ntBASIC20.88■□□□□ 0.93
SSR4P51571 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR4P51571 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR4P51571 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR4P51571 LINC01124-201ENST00000409786 2117 ntBASIC20.87■□□□□ 0.93
SSR4P51571 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.87■□□□□ 0.93
SSR4P51571 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SSR4P51571 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SSR4P51571 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSR4P51571 AC092171.4-201ENST00000609130 632 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms