Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCNN1AP37088 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.84■■□□□ 1.41
SCNN1AP37088 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCNN1AP37088 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCNN1AP37088 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.84■■□□□ 1.41
SCNN1AP37088 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.84■■□□□ 1.41
SCNN1AP37088 AC005703.6-201ENST00000623265 1329 ntBASIC23.84■■□□□ 1.41
SCNN1AP37088 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCNN1AP37088 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
SCNN1AP37088 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCNN1AP37088 UNC93B8-201ENST00000511903 705 ntBASIC23.83■■□□□ 1.41
SCNN1AP37088 AC010997.5-201ENST00000609182 354 ntBASIC23.83■■□□□ 1.41
SCNN1AP37088 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCNN1AP37088 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCNN1AP37088 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCNN1AP37088 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.83■■□□□ 1.4
SCNN1AP37088 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SCNN1AP37088 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.82■■□□□ 1.4
SCNN1AP37088 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.82■■□□□ 1.4
SCNN1AP37088 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.82■■□□□ 1.4
SCNN1AP37088 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCNN1AP37088 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCNN1AP37088 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SCNN1AP37088 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.81■■□□□ 1.4
SCNN1AP37088 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCNN1AP37088 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCNN1AP37088 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SCNN1AP37088 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SCNN1AP37088 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.8■■□□□ 1.4
SCNN1AP37088 TSPY9P-201ENST00000440215 945 ntBASIC23.8■■□□□ 1.4
SCNN1AP37088 TSPY11P-201ENST00000442607 1045 ntBASIC23.8■■□□□ 1.4
SCNN1AP37088 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.8■■□□□ 1.4
SCNN1AP37088 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCNN1AP37088 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
SCNN1AP37088 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
SCNN1AP37088 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.79■■□□□ 1.4
SCNN1AP37088 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SCNN1AP37088 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.79■■□□□ 1.4
SCNN1AP37088 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SCNN1AP37088 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCNN1AP37088 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCNN1AP37088 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCNN1AP37088 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.78■■□□□ 1.4
SCNN1AP37088 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCNN1AP37088 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.78■■□□□ 1.4
SCNN1AP37088 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
SCNN1AP37088 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCNN1AP37088 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCNN1AP37088 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCNN1AP37088 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCNN1AP37088 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.77■■□□□ 1.4
SCNN1AP37088 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCNN1AP37088 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SCNN1AP37088 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.77■■□□□ 1.4
SCNN1AP37088 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCNN1AP37088 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCNN1AP37088 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SCNN1AP37088 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SCNN1AP37088 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 MIR6724-1-201ENST00000616420 92 ntBASIC23.76■■□□□ 1.39
SCNN1AP37088 MIR6724-2-201ENST00000616483 92 ntBASIC23.76■■□□□ 1.39
SCNN1AP37088 MIR6724-4-201ENST00000617390 92 ntBASIC23.76■■□□□ 1.39
SCNN1AP37088 MIR6724-3-201ENST00000622482 92 ntBASIC23.76■■□□□ 1.39
SCNN1AP37088 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.76■■□□□ 1.39
SCNN1AP37088 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
SCNN1AP37088 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCNN1AP37088 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCNN1AP37088 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.75■■□□□ 1.39
SCNN1AP37088 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.75■■□□□ 1.39
SCNN1AP37088 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SCNN1AP37088 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.75■■□□□ 1.39
SCNN1AP37088 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCNN1AP37088 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCNN1AP37088 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCNN1AP37088 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SCNN1AP37088 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCNN1AP37088 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SCNN1AP37088 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCNN1AP37088 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms