Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.7■□□□□ 0.9
GDF1P27539 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GDF1P27539 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.7■□□□□ 0.9
GDF1P27539 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF1P27539 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GDF1P27539 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF1P27539 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF1P27539 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.69■□□□□ 0.9
GDF1P27539 SRD5A1P1-201ENST00000442297 786 ntBASIC20.69■□□□□ 0.9
GDF1P27539 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GDF1P27539 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.69■□□□□ 0.9
GDF1P27539 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF1P27539 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.69■□□□□ 0.9
GDF1P27539 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.68■□□□□ 0.9
GDF1P27539 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.68■□□□□ 0.9
GDF1P27539 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.68■□□□□ 0.9
GDF1P27539 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GDF1P27539 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF1P27539 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GDF1P27539 ALDH1A3-203ENST00000557963 1670 ntBASIC20.67■□□□□ 0.9
GDF1P27539 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
GDF1P27539 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GDF1P27539 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GDF1P27539 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF1P27539 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF1P27539 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF1P27539 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
GDF1P27539 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF1P27539 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
GDF1P27539 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.66■□□□□ 0.9
GDF1P27539 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.66■□□□□ 0.9
GDF1P27539 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF1P27539 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF1P27539 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF1P27539 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDF1P27539 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF1P27539 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GDF1P27539 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
GDF1P27539 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF1P27539 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.65■□□□□ 0.9
GDF1P27539 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
GDF1P27539 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GDF1P27539 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.64■□□□□ 0.89
GDF1P27539 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF1P27539 AC096631.2-201ENST00000436136 790 ntBASIC20.64■□□□□ 0.89
GDF1P27539 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDF1P27539 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF1P27539 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF1P27539 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF1P27539 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF1P27539 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
GDF1P27539 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.63■□□□□ 0.89
GDF1P27539 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF1P27539 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.63■□□□□ 0.89
GDF1P27539 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.63■□□□□ 0.89
GDF1P27539 AL139246.5-201ENST00000606645 996 ntBASIC20.63■□□□□ 0.89
GDF1P27539 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF1P27539 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
GDF1P27539 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.62■□□□□ 0.89
GDF1P27539 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.62■□□□□ 0.89
GDF1P27539 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF1P27539 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.61■□□□□ 0.89
GDF1P27539 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.61■□□□□ 0.89
GDF1P27539 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
GDF1P27539 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF1P27539 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
GDF1P27539 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 LINC01124-201ENST00000409786 2117 ntBASIC20.6■□□□□ 0.89
GDF1P27539 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GDF1P27539 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
GDF1P27539 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF1P27539 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF1P27539 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF1P27539 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GDF1P27539 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
GDF1P27539 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDF1P27539 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms