Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF1AP19438 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1AP19438 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
TNFRSF1AP19438 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1AP19438 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.27■□□□□ 0.67
TNFRSF1AP19438 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFRSF1AP19438 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFRSF1AP19438 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1AP19438 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1AP19438 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1AP19438 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 AC008406.3-201ENST00000620001 1374 ntBASIC19.23■□□□□ 0.67
TNFRSF1AP19438 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF1AP19438 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1AP19438 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1AP19438 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms