Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.7■■□□□ 1.06
TPRP12270 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPRP12270 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.69■■□□□ 1.06
TPRP12270 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.69■■□□□ 1.06
TPRP12270 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPRP12270 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.69■■□□□ 1.06
TPRP12270 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.68■■□□□ 1.06
TPRP12270 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPRP12270 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPRP12270 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.68■■□□□ 1.06
TPRP12270 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.68■■□□□ 1.06
TPRP12270 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPRP12270 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TPRP12270 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPRP12270 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.68■■□□□ 1.06
TPRP12270 ITM2C-210ENST00000620962 501 ntBASIC21.68■■□□□ 1.06
TPRP12270 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPRP12270 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPRP12270 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPRP12270 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPRP12270 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
TPRP12270 POU5F1P3-201ENST00000428824 1078 ntBASIC21.67■■□□□ 1.06
TPRP12270 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.67■■□□□ 1.06
TPRP12270 AL449106.1-201ENST00000608517 1980 ntBASIC21.67■■□□□ 1.06
TPRP12270 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.67■■□□□ 1.06
TPRP12270 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TPRP12270 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TPRP12270 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.67■■□□□ 1.06
TPRP12270 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.67■■□□□ 1.06
TPRP12270 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPRP12270 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPRP12270 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TPRP12270 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TPRP12270 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.66■■□□□ 1.06
TPRP12270 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPRP12270 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPRP12270 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TPRP12270 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPRP12270 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.66■■□□□ 1.06
TPRP12270 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPRP12270 AP004607.4-201ENST00000530158 1459 ntBASIC21.65■■□□□ 1.06
TPRP12270 AP005435.1-201ENST00000529293 1178 ntBASIC21.65■■□□□ 1.06
TPRP12270 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.65■■□□□ 1.06
TPRP12270 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TPRP12270 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.65■■□□□ 1.06
TPRP12270 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPRP12270 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.65■■□□□ 1.06
TPRP12270 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TPRP12270 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.64■■□□□ 1.05
TPRP12270 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.64■■□□□ 1.05
TPRP12270 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.64■■□□□ 1.05
TPRP12270 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TPRP12270 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.64■■□□□ 1.05
TPRP12270 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TPRP12270 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.64■■□□□ 1.05
TPRP12270 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TPRP12270 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.63■■□□□ 1.05
TPRP12270 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.63■■□□□ 1.05
TPRP12270 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.63■■□□□ 1.05
TPRP12270 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.63■■□□□ 1.05
TPRP12270 IGHV3-19-201ENST00000521488 291 ntBASIC21.63■■□□□ 1.05
TPRP12270 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.63■■□□□ 1.05
TPRP12270 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPRP12270 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPRP12270 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPRP12270 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TPRP12270 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TPRP12270 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.61■■□□□ 1.05
TPRP12270 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TPRP12270 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TPRP12270 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPRP12270 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPRP12270 GUSBP6-202ENST00000438529 1198 ntBASIC21.61■■□□□ 1.05
TPRP12270 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.61■■□□□ 1.05
TPRP12270 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TPRP12270 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.61■■□□□ 1.05
TPRP12270 ABCB10P1-201ENST00000614297 2181 ntBASIC21.6■■□□□ 1.05
TPRP12270 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.6■■□□□ 1.05
TPRP12270 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TPRP12270 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPRP12270 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.6■■□□□ 1.05
TPRP12270 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.59■■□□□ 1.05
TPRP12270 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPRP12270 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.59■■□□□ 1.05
TPRP12270 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.59■■□□□ 1.05
TPRP12270 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPRP12270 AL138781.1-201ENST00000566567 1274 ntBASIC21.59■■□□□ 1.05
TPRP12270 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPRP12270 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TPRP12270 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPRP12270 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TPRP12270 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TPRP12270 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TPRP12270 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPRP12270 AC083906.2-201ENST00000511578 360 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms