Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL5A2P05997 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
COL5A2P05997 SLC47A1P1-202ENST00000449666 945 ntBASIC30.56■■■□□ 2.48
COL5A2P05997 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.56■■■□□ 2.48
COL5A2P05997 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
COL5A2P05997 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
COL5A2P05997 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL5A2P05997 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL5A2P05997 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.55■■■□□ 2.48
COL5A2P05997 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.55■■■□□ 2.48
COL5A2P05997 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL5A2P05997 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
COL5A2P05997 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.54■■■□□ 2.48
COL5A2P05997 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL5A2P05997 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.54■■■□□ 2.48
COL5A2P05997 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL5A2P05997 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.54■■■□□ 2.48
COL5A2P05997 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.54■■■□□ 2.48
COL5A2P05997 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
COL5A2P05997 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL5A2P05997 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.53■■■□□ 2.48
COL5A2P05997 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL5A2P05997 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.53■■■□□ 2.48
COL5A2P05997 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.53■■■□□ 2.48
COL5A2P05997 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
COL5A2P05997 AL022069.1-201ENST00000568025 1636 ntBASIC30.53■■■□□ 2.48
COL5A2P05997 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL5A2P05997 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.52■■■□□ 2.48
COL5A2P05997 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL5A2P05997 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL5A2P05997 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.52■■■□□ 2.48
COL5A2P05997 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL5A2P05997 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL5A2P05997 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
COL5A2P05997 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.51■■■□□ 2.48
COL5A2P05997 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL5A2P05997 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL5A2P05997 TSPY26P-201ENST00000476365 1326 ntBASIC30.51■■■□□ 2.47
COL5A2P05997 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
COL5A2P05997 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.5■■■□□ 2.47
COL5A2P05997 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
COL5A2P05997 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
COL5A2P05997 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.5■■■□□ 2.47
COL5A2P05997 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC30.5■■■□□ 2.47
COL5A2P05997 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL5A2P05997 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.49■■■□□ 2.47
COL5A2P05997 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL5A2P05997 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL5A2P05997 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.49■■■□□ 2.47
COL5A2P05997 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.49■■■□□ 2.47
COL5A2P05997 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.49■■■□□ 2.47
COL5A2P05997 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.49■■■□□ 2.47
COL5A2P05997 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.48■■■□□ 2.47
COL5A2P05997 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL5A2P05997 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL5A2P05997 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
COL5A2P05997 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
COL5A2P05997 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
COL5A2P05997 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.48■■■□□ 2.47
COL5A2P05997 AC126544.1-201ENST00000580842 1059 ntBASIC30.48■■■□□ 2.47
COL5A2P05997 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
COL5A2P05997 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL5A2P05997 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.47■■■□□ 2.47
COL5A2P05997 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.47■■■□□ 2.47
COL5A2P05997 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.47■■■□□ 2.47
COL5A2P05997 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL5A2P05997 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL5A2P05997 SLC6A10P-202ENST00000431994 2058 ntBASIC30.47■■■□□ 2.47
COL5A2P05997 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.47■■■□□ 2.47
COL5A2P05997 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL5A2P05997 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.46■■■□□ 2.47
COL5A2P05997 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.46■■■□□ 2.47
COL5A2P05997 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.46■■■□□ 2.47
COL5A2P05997 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL5A2P05997 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
COL5A2P05997 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL5A2P05997 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
COL5A2P05997 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.45■■■□□ 2.47
COL5A2P05997 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.45■■■□□ 2.47
COL5A2P05997 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.45■■■□□ 2.47
COL5A2P05997 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.45■■■□□ 2.47
COL5A2P05997 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
COL5A2P05997 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
COL5A2P05997 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.45■■■□□ 2.46
COL5A2P05997 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
COL5A2P05997 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
COL5A2P05997 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL5A2P05997 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.44■■■□□ 2.46
COL5A2P05997 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL5A2P05997 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.44■■■□□ 2.46
COL5A2P05997 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL5A2P05997 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.44■■■□□ 2.46
COL5A2P05997 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
COL5A2P05997 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.44■■■□□ 2.46
COL5A2P05997 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
COL5A2P05997 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.44■■■□□ 2.46
COL5A2P05997 AC123595.1-201ENST00000440769 1046 ntBASIC30.44■■■□□ 2.46
COL5A2P05997 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.44■■■□□ 2.46
COL5A2P05997 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.44■■■□□ 2.46
COL5A2P05997 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms