Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.18■□□□□ 0.66
CD74P04233 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.18■□□□□ 0.66
CD74P04233 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.18■□□□□ 0.66
CD74P04233 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 RP9P-202ENST00000450133 1212 ntBASIC19.18■□□□□ 0.66
CD74P04233 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.18■□□□□ 0.66
CD74P04233 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.18■□□□□ 0.66
CD74P04233 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CD74P04233 AC007375.3-201ENST00000600936 2314 ntBASIC19.18■□□□□ 0.66
CD74P04233 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.18■□□□□ 0.66
CD74P04233 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.17■□□□□ 0.66
CD74P04233 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD74P04233 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CD74P04233 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.17■□□□□ 0.66
CD74P04233 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.17■□□□□ 0.66
CD74P04233 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.17■□□□□ 0.66
CD74P04233 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.17■□□□□ 0.66
CD74P04233 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD74P04233 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.17■□□□□ 0.66
CD74P04233 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.16■□□□□ 0.66
CD74P04233 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD74P04233 ESRRAP2-201ENST00000418437 1549 ntBASIC19.16■□□□□ 0.66
CD74P04233 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.16■□□□□ 0.66
CD74P04233 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD74P04233 ZNRF2P2-203ENST00000454624 420 ntBASIC19.16■□□□□ 0.66
CD74P04233 AC092296.2-201ENST00000589470 999 ntBASIC19.16■□□□□ 0.66
CD74P04233 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD74P04233 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD74P04233 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD74P04233 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CD74P04233 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 RPS2P35-201ENST00000443417 897 ntBASIC19.15■□□□□ 0.66
CD74P04233 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.15■□□□□ 0.66
CD74P04233 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.15■□□□□ 0.66
CD74P04233 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD74P04233 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.15■□□□□ 0.66
CD74P04233 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CD74P04233 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD74P04233 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD74P04233 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.14■□□□□ 0.65
CD74P04233 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CD74P04233 AC093536.1-201ENST00000569153 554 ntBASIC19.14■□□□□ 0.65
CD74P04233 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
CD74P04233 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.14■□□□□ 0.65
CD74P04233 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD74P04233 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CD74P04233 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.14■□□□□ 0.65
CD74P04233 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD74P04233 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.14■□□□□ 0.65
CD74P04233 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CD74P04233 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.13■□□□□ 0.65
CD74P04233 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CD74P04233 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CD74P04233 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CD74P04233 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD74P04233 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CD74P04233 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD74P04233 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.12■□□□□ 0.65
CD74P04233 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CD74P04233 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD74P04233 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.12■□□□□ 0.65
CD74P04233 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.12■□□□□ 0.65
CD74P04233 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD74P04233 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.12■□□□□ 0.65
CD74P04233 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD74P04233 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.12■□□□□ 0.65
CD74P04233 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD74P04233 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.12■□□□□ 0.65
CD74P04233 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD74P04233 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD74P04233 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD74P04233 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.11■□□□□ 0.65
CD74P04233 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms